School of Mathematics & Statistics

Information about postgraduate research opportunities and how to apply can be found on the Postgraduate Research Study page. Below is a selection of projects that could be undertaken with our group.

Medical image segmentation and uncertainty quantification (PhD)

Supervisors: Surajit Ray
Relevant research groups: Machine Learning and AI, Imaging, Image Processing and Image Analysis

This project focuses on the application of medical imaging and uncertainty quantification for the detection of tumours. The project aims to provide clinicians with accurate, non-invasive methods for detecting and classifying the presence of malignant and benign tumours. It seeks to combine advanced medical imaging technologies such as ultrasound, computed tomography (CT) and magnetic resonance imaging (MRI) with the latest artificial intelligence algorithms. These methods will automate the detection process and may be used for determining malignancy with a high degree of accuracy. Uncertainty quantification (UQ) techniques will help generate a more precise prediction for tumour malignancy by providing a characterisation of the degree of uncertainty associated with the diagnosis. The combination of medical imaging and UQ will significantly decrease the requirement for performing invasive medical procedures such as biopsies. This will improve the accuracy of the tumour detection process and reduce the duration of diagnosis. The project will also benefit from the development of novel image processing algorithms (e.g. deep learning) and machine learning models. These algorithms and models will help improve the accuracy of the tumour detection process and assist clinicians in making the best treatment decisions.

Analysis of spatially correlated functional data objects (PhD)

Supervisors: Surajit Ray
Relevant research groups: Modelling in Space and Time, Computational Statistics, Nonparametric and Semi-parametric Statistics, Imaging, Image Processing and Image Analysis

Historically, functional data analysis techniques have widely been used to analyze traditional time series data, albeit from a different perspective. Of late, FDA techniques are increasingly being used in domains such as environmental science, where the data are spatio-temporal in nature and hence is it typical to consider such data as functional data where the functions are correlated in time or space. An example where modeling the dependencies is crucial is in analyzing remotely sensed data observed over a number of years across the surface of the earth, where each year forms a single functional data object. One might be interested in decomposing the overall variation across space and time and attribute it to covariates of interest. Another interesting class of data with dependence structure consists of weather data on several variables collected from balloons where the domain of the functions is a vertical strip in the atmosphere, and the data are spatially correlated. One of the challenges in such type of data is the problem of missingness, to address which one needs develop appropriate spatial smoothing techniques for spatially dependent functional data. There are also interesting design of experiment issues, as well as questions of data calibration to account for the variability in sensing instruments. Inspite of the research initiative in analyzing dependent functional data there are several unresolved problems, which the student will work on:

• robust statistical models for incorporating temporal and spatial dependencies in functional data
• developing reliable prediction and interpolation techniques for dependent functional data
• developing inferential framework for testing hypotheses related to simplified dependent structures
• analysing sparsely observed functional data by borrowing information from neighbours
• visualisation of data summaries associated with dependent functional data
• Clustering of functional data

Generating deep fake left ventricles: a step towards personalised heart treatments (PhD)

Supervisors: Andrew Elliott, Vinny Davies, Hao Gao
Relevant research groups: Machine Learning and AI, Emulation and Uncertainty Quantification, Biostatistics, Epidemiology and Health Applications, Imaging, Image Processing and Image Analysis

Personalised medicine is an exciting avenue in the field of cardiac healthcare where an understanding of patient-specific mechanisms can lead to improved treatments (Gao et al., 2017). The use of mathematical models to link the underlying properties of the heart with cardiac imaging offers the possibility of obtaining important parameters of heart function non-invasively (Gao et al., 2015). Unfortunately, current estimation methods rely on complex mathematical forward simulations, resulting in a solution taking hours, a time frame not suitable for real-time treatment decisions. To increase the applicability of these methods, statistical emulation methods have been proposed as an efficient way of estimating the parameters (Davies et al., 2019; Noè et al., 2019). In this approach, simulations of the mathematical model are run in advance and then machine learning based methods are used to estimate the relationship between the cardiac imaging and the parameters of interest. These methods are, however, limited by our ability to understand the how cardiac geometry varies across patients which is in term limited by the amount of data available (Romaszko et al., 2019). In this project we will look at AI based methods for generating fake cardiac geometries which can be used to increase the amount of data (Qiao et al., 2023). We will explore different types of AI generation, including Generative Adversarial Networks or Variational Autoencoders, to understand how we can generate better 3D and 4D models of the fake left ventricles and create an improved emulation strategy that can make use of them.

Regular seminars relevant to the group are held as part of the Statistics seminar series. The seminars cover various aspects across the AI3 initiative and usually span multiple groups. You can find more information on the Statistics seminar series page, where you can also subscribe to the seminar series calendar.