Mr Spyros Lytras
- Affiliate Researcher (School of Infection & Immunity)
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Lytras, S., Lamb, K. D., Ito, J., Grove, J. , Yuan, K. , Sato, K., Hughes, J. and Robertson, D. L. (2025) Pathogen genomic surveillance and the AI revolution. Journal of Virology, 99(2), e0160124. (doi: 10.1128/jvi.01601-24) (PMID:39878472) (PMCID:39878472)
Lamb, K. D., Hughes, J. , Lytras, S., Young, F., Koci, O., Herzig, J., Lovell, S. C.,, Grove, J. , Yuan, K. and Robertson, D. L. (2024) From a single sequence to evolutionary trajectories: protein language models capture the evolutionary potential of SARS-CoV-2 protein sequences. bioRxiv, (doi: 10.1101/2024.07.05.602129)
Tolentino, J. E., Lytras, S., Ito, J. and Sato, K. (2024) Recombination analysis on the receptor switching event of MERS-CoV and its close relatives: implications for the emergence of MERS-CoV. Virology Journal, 21, 84. (doi: 10.1186/s12985-024-02358-2) (PMID:38600521) (PMCID:PMC11008012)
Mifsud, J. C.O., Lytras, S., Oliver, M. R. , Toon, K. , Costa, V. A., Holmes, E. C. and Grove, J. (2024) Mapping glycoprotein structure reveals defining events in the evolution of the Flaviviridae. bioRxiv, (doi: 10.1101/2024.02.06.579159)
Lytras, S. et al. (2023) Resurrection of 2′-5′-oligoadenylate synthetase 1 (OAS1) from the ancestor of modern horseshoe bats blocks SARS-CoV-2 replication. PLoS Biology, 21(11), e3002398. (doi: 10.1371/journal.pbio.3002398) (PMID:38015855)
Blanco-Melo, D., Campbell, M. A., Zhu, H., Dennis, T. P.W., Modha, S. , Lytras, S., Hughes, J. , Gatseva, A. and Gifford, R. J. (2023) A novel approach to exploring the dark genome and its application to mapping of the vertebrate virus ‘fossil record’. bioRxiv, (doi: 10.1101/2023.10.17.562709)
Lytras, S., Lamb, K. D., Ito, J., Grove, J. , Yuan, K. , Sato, K., Hughes, J. and Robertson, D. L. (2025) Pathogen genomic surveillance and the AI revolution. Journal of Virology, 99(2), e0160124. (doi: 10.1128/jvi.01601-24) (PMID:39878472) (PMCID:39878472)
Lamb, K. D., Hughes, J. , Lytras, S., Young, F., Koci, O., Herzig, J., Lovell, S. C.,, Grove, J. , Yuan, K. and Robertson, D. L. (2024) From a single sequence to evolutionary trajectories: protein language models capture the evolutionary potential of SARS-CoV-2 protein sequences. bioRxiv, (doi: 10.1101/2024.07.05.602129)
Tolentino, J. E., Lytras, S., Ito, J. and Sato, K. (2024) Recombination analysis on the receptor switching event of MERS-CoV and its close relatives: implications for the emergence of MERS-CoV. Virology Journal, 21, 84. (doi: 10.1186/s12985-024-02358-2) (PMID:38600521) (PMCID:PMC11008012)
Mifsud, J. C.O., Lytras, S., Oliver, M. R. , Toon, K. , Costa, V. A., Holmes, E. C. and Grove, J. (2024) Mapping glycoprotein structure reveals defining events in the evolution of the Flaviviridae. bioRxiv, (doi: 10.1101/2024.02.06.579159)
Lytras, S. et al. (2023) Resurrection of 2′-5′-oligoadenylate synthetase 1 (OAS1) from the ancestor of modern horseshoe bats blocks SARS-CoV-2 replication. PLoS Biology, 21(11), e3002398. (doi: 10.1371/journal.pbio.3002398) (PMID:38015855)
Blanco-Melo, D., Campbell, M. A., Zhu, H., Dennis, T. P.W., Modha, S. , Lytras, S., Hughes, J. , Gatseva, A. and Gifford, R. J. (2023) A novel approach to exploring the dark genome and its application to mapping of the vertebrate virus ‘fossil record’. bioRxiv, (doi: 10.1101/2023.10.17.562709)