2024

Brachmann, M. and Parsons, K. (2024) Adaptive divergence and radiations: insights from evo-devo. In: Reference Module in Life Sciences. Elsevier. ISBN 9780128096338 (doi: 10.1016/B978-0-443-15750-9.00012-4)

2023

Langille, B. L., Kess, T., Brachmann, M. , Nugent, C. M., Messmer, A., Duffy, S. J., Holborn, M. K., Van Wyngaarden, M., Knutsen, T. M. and Kent, M. (2023) Fine-scale environmentally associated spatial structure of lumpfish (Cyclopterus lumpus) across the Northwest Atlantic. Evolutionary Applications, 16(9), pp. 1619-1636. (doi: 10.1111/eva.13590) (PMID:37752959) (PMCID:PMC10519416)

Nugent, C. M., Kess, T., Brachmann, M. K. , Langille, B. L., Duffy, S. J., Lehnert, S. J., Wringe, B. F., Bentzen, P. and Bradbury, I. R. (2023) Whole-genome sequencing reveals fine-scale environment-associated divergence near the range limits of a temperate reef fish. Molecular Ecology, 32(17), pp. 4742-4762. (doi: 10.1111/mec.17063) (PMID:37430462)

Nugent, C. M. et al. (2023) Genomic and machine learning-based screening of aquaculture-associated introgression into at-risk wild North American Atlantic salmon (Salmo salar) populations. Molecular Ecology Resources, (doi: 10.1111/1755-0998.13811) (PMID:37246351) (Early Online Publication)

2022

Brachmann, M. K. , Parsons, K. , Skúlason, S., Gaggiotti, O. and Ferguson, M. (2022) Variation in the genomic basis of parallel phenotypic and ecological divergence in benthic and pelagic morphs of Icelandic Arctic charr (Salvelinus alpinus). Molecular Ecology, 31(18), pp. 4688-4706. (doi: 10.1111/mec.16625) (PMID:35861579)

Holborn, M. K. et al. (2022) Reference genome of lumpfish Cyclopterus lumpus Linnaeus provides evidence of male heterogametic sex determination through the AMH pathway. Molecular Ecology Resources, 22(4), pp. 1427-1439. (doi: 10.1111/1755-0998.13565) (PMID:34859595)

2021

Brachmann, M. K. , Parsons, K. , Skúlason, S. and Ferguson, M. M. (2021) The interaction of resource use and gene flow on the phenotypic divergence of benthic and pelagic morphs of Icelandic Arctic charr (Salvelinus alpinus). Ecology and Evolution, 11(12), pp. 7315-7334. (doi: 10.1002/ece3.7563) (PMID:34188815) (PMCID:PMC8216915)

Kess, T., Brachmann, M. and Boulding, E. G. (2021) Putative chromosomal rearrangements are associated primarily with ecotype divergence rather than geographic separation in an intertidal, poorly dispersing snail. Journal of Evolutionary Biology, 34(1), pp. 193-207. (doi: 10.1111/jeb.13724) (PMID:33108001)

2019

Nugent, C. M. et al. (2019) Design and characterization of an 87k SNP genotyping array for Arctic charr (Salvelinus alpinus). PLoS ONE, 14(4), e0215008. (doi: 10.1371/journal.pone.0304369) (PMID:38833497) (PMCID:PMC11149859)

2018

Fisher, D. N., Brachmann, M. and Burant, J. B. (2018) Complex dynamics and the development of behavioural individuality. Animal Behaviour, 138, e1-e6. (doi: 10.1016/j.anbehav.2018.02.015)

Articles

Langille, B. L., Kess, T., Brachmann, M. , Nugent, C. M., Messmer, A., Duffy, S. J., Holborn, M. K., Van Wyngaarden, M., Knutsen, T. M. and Kent, M. (2023) Fine-scale environmentally associated spatial structure of lumpfish (Cyclopterus lumpus) across the Northwest Atlantic. Evolutionary Applications, 16(9), pp. 1619-1636. (doi: 10.1111/eva.13590) (PMID:37752959) (PMCID:PMC10519416)

Nugent, C. M., Kess, T., Brachmann, M. K. , Langille, B. L., Duffy, S. J., Lehnert, S. J., Wringe, B. F., Bentzen, P. and Bradbury, I. R. (2023) Whole-genome sequencing reveals fine-scale environment-associated divergence near the range limits of a temperate reef fish. Molecular Ecology, 32(17), pp. 4742-4762. (doi: 10.1111/mec.17063) (PMID:37430462)

Nugent, C. M. et al. (2023) Genomic and machine learning-based screening of aquaculture-associated introgression into at-risk wild North American Atlantic salmon (Salmo salar) populations. Molecular Ecology Resources, (doi: 10.1111/1755-0998.13811) (PMID:37246351) (Early Online Publication)

Brachmann, M. K. , Parsons, K. , Skúlason, S., Gaggiotti, O. and Ferguson, M. (2022) Variation in the genomic basis of parallel phenotypic and ecological divergence in benthic and pelagic morphs of Icelandic Arctic charr (Salvelinus alpinus). Molecular Ecology, 31(18), pp. 4688-4706. (doi: 10.1111/mec.16625) (PMID:35861579)

Holborn, M. K. et al. (2022) Reference genome of lumpfish Cyclopterus lumpus Linnaeus provides evidence of male heterogametic sex determination through the AMH pathway. Molecular Ecology Resources, 22(4), pp. 1427-1439. (doi: 10.1111/1755-0998.13565) (PMID:34859595)

Brachmann, M. K. , Parsons, K. , Skúlason, S. and Ferguson, M. M. (2021) The interaction of resource use and gene flow on the phenotypic divergence of benthic and pelagic morphs of Icelandic Arctic charr (Salvelinus alpinus). Ecology and Evolution, 11(12), pp. 7315-7334. (doi: 10.1002/ece3.7563) (PMID:34188815) (PMCID:PMC8216915)

Kess, T., Brachmann, M. and Boulding, E. G. (2021) Putative chromosomal rearrangements are associated primarily with ecotype divergence rather than geographic separation in an intertidal, poorly dispersing snail. Journal of Evolutionary Biology, 34(1), pp. 193-207. (doi: 10.1111/jeb.13724) (PMID:33108001)

Nugent, C. M. et al. (2019) Design and characterization of an 87k SNP genotyping array for Arctic charr (Salvelinus alpinus). PLoS ONE, 14(4), e0215008. (doi: 10.1371/journal.pone.0304369) (PMID:38833497) (PMCID:PMC11149859)

Fisher, D. N., Brachmann, M. and Burant, J. B. (2018) Complex dynamics and the development of behavioural individuality. Animal Behaviour, 138, e1-e6. (doi: 10.1016/j.anbehav.2018.02.015)

Book Sections

Brachmann, M. and Parsons, K. (2024) Adaptive divergence and radiations: insights from evo-devo. In: Reference Module in Life Sciences. Elsevier. ISBN 9780128096338 (doi: 10.1016/B978-0-443-15750-9.00012-4)