Mohammad Saiful Islam Sajib

Room: 337, Jarrett Building

University of Glasgow

464 Bearsden Rd., G61 1QH

 

 

ORCID iDhttps://orcid.org/0000-0002-3962-9805

Research title: Rapid sequencing-based detection of bacterial species and their antimicrobial resistance genes for improved patient outcomes in bloodstream infections

Research Summary

My research focuses on infectious diseases, and I aim to improve public health by generating evidence for future policy decisions. Previously I worked as a microbiologist at Child Health Research Foundation in Bangladesh. Currently, as a Ph.D. student at the University of Glasgow, I am utilizing clinical metagenomics to diagnose sepsis, improve patient outcomes, and reduce antimicrobial resistance.

 

 

Publications

List by: Type | Date

Jump to: 2024 | 2023 | 2022 | 2021 | 2020 | 2019 | 2018
Number of items: 20.

2024

Sajib, M. S. I. , Brunker, K. , Oravcova, K. , Everest, P. , Murphy, M. E. and Forde, T. (2024) Advances in host depletion and pathogen enrichment methods for rapid sequencing-based diagnosis of bloodstream infection. Journal of Molecular Diagnostics, 26(9), pp. 741-753. (doi: 10.1016/j.jmoldx.2024.05.008) (PMID:38925458)

2023

Carey, M. E. et al. (2023) Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Salmonella Typhi genomes. eLife, 12, e85867. (doi: 10.7554/elife.85867) (PMID:37697804) (PMCID:PMC10506625)

2022

Tanmoy, A. M. et al. (2022) Paratype: a genotyping tool for Salmonella Paratyphi A reveals its global genomic diversity. Nature Communications, 13, 7912. (doi: 10.1038/s41467-022-35587-6) (PMID:36564386) (PMCID:PMC9782287)

da Silva, K. E. et al. (2022) The international and intercontinental spread and expansion of antimicrobial-resistant Salmonella Typhi: a genomic epidemiology study. Lancet Microbe, 3(8), e567-e577. (doi: 10.1016/S2666-5247(22)00093-3) (PMID:35750070) (PMCID:PMC9329132)

2021

Tanmoy, A. M., Westeel, E., De Bruyne, K., Goris, J., Rajoharison, A., Sajib, M. S. I. , van Belkum, A., Saha, S. K., Komurian-Pradel, F. and Endtz, H. P. (2021) Correction for Tanmoy et al., "Salmonella enterica serovar Typhi in Bangladesh: exploration of genomic diversity and antimicrobial resistance". mBio, 12(3), e01044-21. (doi: 10.1128/mbio.01044-21) (PMID:34076459)

Sajib, M. S. I. , Tanmoy, A. M., Hooda, Y., Rahman, H., Andrews, J. R., Garrett, D. O., Endtz, H. P., Saha, S. K. and Saha, S. (2021) Tracking the emergence of azithromycin resistance in multiple genotypes of typhoidal Salmonella. mBio, 12(1), e03481-20. (doi: 10.1128/mbio.03481-20) (PMID:33593966)

Malaker, R., Sajib, M. S. I. , Malaker, A. R., Rahman, H., Hooda, Y., Hasanuzzaman, M., Saha, S. K. and Saha, S. (2021) Genome sequence of a dengue virus serotype 2 strain identified during the 2019 outbreak in Bangladesh. Microbiology Resource Announcements, 10(1), e01246-20. (doi: 10.1128/MRA.01246-20) (PMID:33414342)

Farthing, A. G. et al. (2021) Sepsis: when a simple infection becomes deadly. Frontiers for Young Minds, 9, 639681. (doi: 10.3389/frym.2021.639681)

Saha, S. et al. (2021) COVID-19 rise in Bangladesh correlates with increasing detection of B.1.351 variant. BMJ Global Health, 6(5), e006012. (doi: 10.1136/bmjgh-2021-006012) (PMID:33952579) (PMCID:PMC8102859)

2020

Saha, S. et al. (2020) The direct and indirect impact of SARS-CoV-2 infections on neonates: a series of 26 cases in Bangladesh. Pediatric Infectious Disease Journal, 39(12), e398-e405. (doi: 10.1097/inf.0000000000002921) (PMID:33031143) (PMCID:PMC7654949)

Tanmoy, A. M., Saha, C., Sajib, M. S. I. , Saha, S., Komurian-Pradel, F., van Belkum, A., Louwen, R., Saha, S. K. and Endtz, H. P. (2020) CRISPR-Cas diversity in clinical Salmonella enterica serovar Typhi isolates from South Asian countries. Genes, 11(11), 1365. (doi: 10.3390/genes11111365) (PMID:33218076) (PMCID:PMC7698835)

Saha, S., Sajib, M. S. I. , Garrett, D. and Qamar, F. N. (2020) Antimicrobial resistance in typhoidal Salmonella: around the world in 3 days. Clinical Infectious Diseases, 71(Suppl2), S91-S95. (doi: 10.1093/cid/ciaa366) (PMID:32725234) (PMCID:PMC7388716)

Hooda, Y., Tanmoy, A. M., Sajib, M. S. I. and Saha, S. (2020) Mass azithromycin administration: considerations in an increasingly resistant world. BMJ Global Health, 5(6), e002446. (doi: 10.1136/bmjgh-2020-002446) (PMID:32522739) (PMCID:PMC7287495)

Saha, S. et al. (2020) Complete genome sequence of a novel coronavirus (SARS-CoV-2) isolate from Bangladesh. Microbiology Resource Announcements, 9(24), e00568-20. (doi: 10.1128/MRA.00568-20) (PMID:32527780) (PMCID:PMC7291105)

2019

Saha, S. et al. (2019) Unbiased metagenomic sequencing for pediatric meningitis in Bangladesh reveals neuroinvasive Chikungunya virus outbreak and other unrealized pathogens. mBio, 10(6), e02877-19. (doi: 10.1128/mBio.02877-19) (PMID:31848287) (PMCID:PMC6918088)

Hooda, Y., Sajib, M. S. I. , Rahman, H., Luby, S. P., Bondy-Denomy, J., Santosham, M., Andrews, J. R., Saha, S. K. and Saha, S. (2019) Molecular mechanism of azithromycin resistance among typhoidal Salmonella strains in Bangladesh identified through passive pediatric surveillance. PLoS Neglected Tropical Diseases, 13(11), e0007868. (doi: 10.1371/journal.pntd.0007868) (PMID:31730615) (PMCID:PMC6881056)

Saha, S. et al. (2019) Epidemiology of typhoid and paratyphoid: implications for vaccine policy. Clinical Infectious Diseases, 68(Suppl2), S117-S123. (doi: 10.1093/cid/ciy1124) (PMID:30845325) (PMCID:PMC6405278)

Saha, S., Tanmoy, A. M., Andrews, J. R., Sajib, M. S. I. , Yu, A. T., Baker, S., Luby, S. P. and Saha, S. K. (2019) Evaluating PCR-based detection of Salmonella Typhi and Paratyphi A in the environment as an enteric fever surveillance tool. American Journal of Tropical Medicine and Hygiene, 100(1), pp. 43-46. (doi: 10.4269/ajtmh.18-0428) (PMID:30426919) (PMCID:PMC6335896)

2018

Djeghout, B., Saha, S., Sajib, M. S. I. , Tanmoy, A. M., Islam, M., Kay, G. L., Langridge, G. C., Endtz, H. P., Wain, J. and Saha, S. K. (2018) Ceftriaxone-resistant Salmonella Typhi carries an IncI1-ST31 plasmid encoding CTX-M-15. Journal of Medical Microbiology, 67(5), pp. 620-627. (doi: 10.1099/jmm.0.000727) (PMID:29616895)

Tanmoy, A. M., Westeel, E., De Bruyne, K., Goris, J., Rajoharison, A., Sajib, M. S. I. , van Belkum, A., Saha, S. K., Komurian-Pradel, F. and Endtz, H. P. (2018) Salmonella enterica serovar Typhi in Bangladesh: exploration of genomic diversity and antimicrobial resistance. mBio, 9(6), e02112-18. (doi: 10.1128/mbio.02112-18) (PMID:30425150) (PMCID:PMC6234861)

This list was generated on Thu Nov 21 03:51:17 2024 GMT.
Jump to: Articles
Number of items: 20.

Articles

Sajib, M. S. I. , Brunker, K. , Oravcova, K. , Everest, P. , Murphy, M. E. and Forde, T. (2024) Advances in host depletion and pathogen enrichment methods for rapid sequencing-based diagnosis of bloodstream infection. Journal of Molecular Diagnostics, 26(9), pp. 741-753. (doi: 10.1016/j.jmoldx.2024.05.008) (PMID:38925458)

Carey, M. E. et al. (2023) Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Salmonella Typhi genomes. eLife, 12, e85867. (doi: 10.7554/elife.85867) (PMID:37697804) (PMCID:PMC10506625)

Tanmoy, A. M. et al. (2022) Paratype: a genotyping tool for Salmonella Paratyphi A reveals its global genomic diversity. Nature Communications, 13, 7912. (doi: 10.1038/s41467-022-35587-6) (PMID:36564386) (PMCID:PMC9782287)

da Silva, K. E. et al. (2022) The international and intercontinental spread and expansion of antimicrobial-resistant Salmonella Typhi: a genomic epidemiology study. Lancet Microbe, 3(8), e567-e577. (doi: 10.1016/S2666-5247(22)00093-3) (PMID:35750070) (PMCID:PMC9329132)

Tanmoy, A. M., Westeel, E., De Bruyne, K., Goris, J., Rajoharison, A., Sajib, M. S. I. , van Belkum, A., Saha, S. K., Komurian-Pradel, F. and Endtz, H. P. (2021) Correction for Tanmoy et al., "Salmonella enterica serovar Typhi in Bangladesh: exploration of genomic diversity and antimicrobial resistance". mBio, 12(3), e01044-21. (doi: 10.1128/mbio.01044-21) (PMID:34076459)

Sajib, M. S. I. , Tanmoy, A. M., Hooda, Y., Rahman, H., Andrews, J. R., Garrett, D. O., Endtz, H. P., Saha, S. K. and Saha, S. (2021) Tracking the emergence of azithromycin resistance in multiple genotypes of typhoidal Salmonella. mBio, 12(1), e03481-20. (doi: 10.1128/mbio.03481-20) (PMID:33593966)

Malaker, R., Sajib, M. S. I. , Malaker, A. R., Rahman, H., Hooda, Y., Hasanuzzaman, M., Saha, S. K. and Saha, S. (2021) Genome sequence of a dengue virus serotype 2 strain identified during the 2019 outbreak in Bangladesh. Microbiology Resource Announcements, 10(1), e01246-20. (doi: 10.1128/MRA.01246-20) (PMID:33414342)

Farthing, A. G. et al. (2021) Sepsis: when a simple infection becomes deadly. Frontiers for Young Minds, 9, 639681. (doi: 10.3389/frym.2021.639681)

Saha, S. et al. (2021) COVID-19 rise in Bangladesh correlates with increasing detection of B.1.351 variant. BMJ Global Health, 6(5), e006012. (doi: 10.1136/bmjgh-2021-006012) (PMID:33952579) (PMCID:PMC8102859)

Saha, S. et al. (2020) The direct and indirect impact of SARS-CoV-2 infections on neonates: a series of 26 cases in Bangladesh. Pediatric Infectious Disease Journal, 39(12), e398-e405. (doi: 10.1097/inf.0000000000002921) (PMID:33031143) (PMCID:PMC7654949)

Tanmoy, A. M., Saha, C., Sajib, M. S. I. , Saha, S., Komurian-Pradel, F., van Belkum, A., Louwen, R., Saha, S. K. and Endtz, H. P. (2020) CRISPR-Cas diversity in clinical Salmonella enterica serovar Typhi isolates from South Asian countries. Genes, 11(11), 1365. (doi: 10.3390/genes11111365) (PMID:33218076) (PMCID:PMC7698835)

Saha, S., Sajib, M. S. I. , Garrett, D. and Qamar, F. N. (2020) Antimicrobial resistance in typhoidal Salmonella: around the world in 3 days. Clinical Infectious Diseases, 71(Suppl2), S91-S95. (doi: 10.1093/cid/ciaa366) (PMID:32725234) (PMCID:PMC7388716)

Hooda, Y., Tanmoy, A. M., Sajib, M. S. I. and Saha, S. (2020) Mass azithromycin administration: considerations in an increasingly resistant world. BMJ Global Health, 5(6), e002446. (doi: 10.1136/bmjgh-2020-002446) (PMID:32522739) (PMCID:PMC7287495)

Saha, S. et al. (2020) Complete genome sequence of a novel coronavirus (SARS-CoV-2) isolate from Bangladesh. Microbiology Resource Announcements, 9(24), e00568-20. (doi: 10.1128/MRA.00568-20) (PMID:32527780) (PMCID:PMC7291105)

Saha, S. et al. (2019) Unbiased metagenomic sequencing for pediatric meningitis in Bangladesh reveals neuroinvasive Chikungunya virus outbreak and other unrealized pathogens. mBio, 10(6), e02877-19. (doi: 10.1128/mBio.02877-19) (PMID:31848287) (PMCID:PMC6918088)

Hooda, Y., Sajib, M. S. I. , Rahman, H., Luby, S. P., Bondy-Denomy, J., Santosham, M., Andrews, J. R., Saha, S. K. and Saha, S. (2019) Molecular mechanism of azithromycin resistance among typhoidal Salmonella strains in Bangladesh identified through passive pediatric surveillance. PLoS Neglected Tropical Diseases, 13(11), e0007868. (doi: 10.1371/journal.pntd.0007868) (PMID:31730615) (PMCID:PMC6881056)

Saha, S. et al. (2019) Epidemiology of typhoid and paratyphoid: implications for vaccine policy. Clinical Infectious Diseases, 68(Suppl2), S117-S123. (doi: 10.1093/cid/ciy1124) (PMID:30845325) (PMCID:PMC6405278)

Saha, S., Tanmoy, A. M., Andrews, J. R., Sajib, M. S. I. , Yu, A. T., Baker, S., Luby, S. P. and Saha, S. K. (2019) Evaluating PCR-based detection of Salmonella Typhi and Paratyphi A in the environment as an enteric fever surveillance tool. American Journal of Tropical Medicine and Hygiene, 100(1), pp. 43-46. (doi: 10.4269/ajtmh.18-0428) (PMID:30426919) (PMCID:PMC6335896)

Djeghout, B., Saha, S., Sajib, M. S. I. , Tanmoy, A. M., Islam, M., Kay, G. L., Langridge, G. C., Endtz, H. P., Wain, J. and Saha, S. K. (2018) Ceftriaxone-resistant Salmonella Typhi carries an IncI1-ST31 plasmid encoding CTX-M-15. Journal of Medical Microbiology, 67(5), pp. 620-627. (doi: 10.1099/jmm.0.000727) (PMID:29616895)

Tanmoy, A. M., Westeel, E., De Bruyne, K., Goris, J., Rajoharison, A., Sajib, M. S. I. , van Belkum, A., Saha, S. K., Komurian-Pradel, F. and Endtz, H. P. (2018) Salmonella enterica serovar Typhi in Bangladesh: exploration of genomic diversity and antimicrobial resistance. mBio, 9(6), e02112-18. (doi: 10.1128/mbio.02112-18) (PMID:30425150) (PMCID:PMC6234861)

This list was generated on Thu Nov 21 03:51:17 2024 GMT.

Supervisors

Grants

  • Travel grant: 10th Congress of the World Society for Pediatric Infectious Diseases.
  • Travel grant: 11th International Conference on Typhoid and Other Invasive Salmonelloses.
  • Travel grant: 68th Annual Meeting of the American Society of Tropical Medicine and Hygiene
  • Travel grant: SEAP-Genomic Sequence Analysis workshop at the Department of Medicine, University of Cambridge

Conference

  • Congress of the World Society for Pediatric Infectious Diseases. December 2017
  • International Conference on Typhoid and Other Invasive Salmonelloses, March 2019
  • Annual Meeting of the American Society of Tropical Medicine and Hygiene, June 2019
  • Annual Meeting of the American Society of Tropical Medicine and Hygiene, November 2020
  • Microbiology Society's Annual Conference, April 2021
  • Applied Bioinformatics and Public Health Microbiology (Virtual Conference), May 2021